traveling throughout the body," Professor
Giorgio says. "We are able to quantify the success rates of the
method and can determine the percentage of particles that
successfully attach to the tumor we are targeting."
At-home cancer test
Then Professor Giorgio had another idea. Since the protective
coating of the new nanoparticle is broken down by proteolysis into
a byproduct molecule that is not ordinarily found in the body, why
not test for that byproduct in the urine stream, as in a home
pregnancy test?
Professor Giorgio and his associates are developing and testing the
optimal composition of the coating, a chain of fatty liposome
molecules called polyethylene glycol (PEG) and peptide bonds to
link them. These liposome molecules are chemically similar to the
membranes of human cells, which enables them to enter cells more
easily.
By designing these molecules to include a PEG that will break off
only during proteoloysis caused by tumor cells, Professor Giorgio's
team can pave the way toward producing a simple urine test that
checks for this broken-off PEG that is excreted in the urine.
"The ease and low cost of this approach establishes a new paradigm
for breast cancer screening that offers the frequency and practical
accessibility of self-examination with sensitivity that exceeds
current medical imaging methods," he says.
Panning for Peptides
Getting inside a cancer cell without invading its healthy neighbors
is hard enough, but getting into the nucleus to either heal through
genetic engineering or to destroy through chemotherapy is quite
another challenge.
But an important one. The effectiveness of conventional
chemotherapy is limited by its impact on healthy cells and its
rather random success at penetrating cell nuclei.
"The nucleus containing the cell's DNA is extremely selective about
what molecules are allowed inside," Professor Giorgio says. "We
have been searching for peptide ligands that can bind to the
nucleus and allow a molecular payload to be transferred into the
nucleus."
This task is a bit like finding a needle in a haystack. Peptides,
which are molecules made up of several amino acids, vary on the
order of millions of varieties. Where to begin?
With all of them, Professor Giorgio decided, thanks to a process
called "biopanning."
Biopanning begins with a "library" of viruses that invade bacteria
but are harmless to humans. These viruses, called bacteriophages or
phages, each consist of a tubular-shaped body with several protein
streamers. One of these streamers includes a sequence of seven
amino acids that create the peptide bond. Within the library or
collection of these phages, purchased from a biotechnology vendor,
all possible combinations of these seven amino acid peptides are
represented.
"We need seven amino acids to ensure sufficient peptide binding to
the surface of the nucleus," Professor Giorgio says. "Each phage in
the library has one peptide sequence of seven amino acids, so
they're all different."
The phages are poured onto two cell lines of human cells, one line
of normal cells and the other of breast cancer cells. After waiting
a day for the phages to do their work of entering the cell nuclei,
the researchers use a detergent method that breaks open the cells
but keeps the nuclei intact. They then put the mixtures into a
centrifuge containing high-density fluid to extract the nuclei.
Once they have the nuclei, they put them into a low pH solution
that bursts the nuclei and frees the phages. These phages are the
successful ones.
Then next step is to put the successful phages into dishes of e.
coli bacteria to let the phages replicate. These phages are sent
through two human cell lines, as with the first process, harvesting
the successful phages and introducing this next batch into e. coli
bacteria in order to grow.
After the third round of biopanning, the samples are taken to the
Vanderbilt DNA Sequencing Facility to be genetically sequenced.
Researchers there know where to look on the phages' genome in order
to determine the peptide sequence that codes for the phages' amino
acids. These peptide sequences, the recipes for the peptides
sequence that can carry genetic or chemotherapy payload into the
nuclei, are matched against known peptide sequences.
Hitting Paydirt
Professor Giorgio's team has already test-driven one of the
successful, previously unknown, peptides and has found that it can
indeed deliver into the nucleus a phage as large as 70 nanometers,
which is about the size of the liposome used to deliver gene
therapy.
"This is particularly exciting because we can harness the
penetration power of bacterial viruses' peptide sequence, without
using the virus itself, to pull non-viral liposomes into the
nucleus," Professor Giorgio says. "At a time when the FDA is
concerned about the use of retroviruses in gene therapy, this
discovery can be a highly beneficial method."
This success has captured the attention of another collaborator,
Dr. Dennis Hallahan, professor of radiation oncology and chair of
the department. Dr. Hallahan had already conducted research into
using peptides to bond to tumor-feeding endothelial cells, which
are cells that line the blood vessels. In addition to conducting
National Institutes of Health with Professor Giorgio, Dr. Hallahan
has opened his animal laboratories for Professor Giorgio's use in
the breast cancer research.
"He has been invaluable to us in helping us take our ideas and
winnow through them to focus on the ones that have a good chance of
being accepted at the clinical level," Professor Giorgio says.